Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 AC096631.2-201ENST00000436136 790 ntBASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLCA3PQ9Y6N3 LINC01529-204ENST00000636474 1715 ntBASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 AC079630.1-202ENST00000618127 1840 ntBASIC20.9■□□□□ 0.94
CLCA3PQ9Y6N3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCA3PQ9Y6N3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLCA3PQ9Y6N3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCA3PQ9Y6N3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
CLCA3PQ9Y6N3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCA3PQ9Y6N3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCA3PQ9Y6N3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCA3PQ9Y6N3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCA3PQ9Y6N3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCA3PQ9Y6N3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 UNC93B3-201ENST00000308076 687 ntBASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLCA3PQ9Y6N3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCA3PQ9Y6N3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 ANOS2P-203ENST00000472227 1816 ntBASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 AC006455.2-201ENST00000429931 906 ntBASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 DUX4L4-201ENST00000566884 1269 ntBASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 AL139246.5-201ENST00000606645 996 ntBASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CLCA3PQ9Y6N3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.85■□□□□ 0.93
CLCA3PQ9Y6N3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 AL138724.1-201ENST00000606771 1088 ntBASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 AL136162.1-201ENST00000607711 1078 ntBASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 AC110285.6-201ENST00000617652 491 ntBASIC20.84■□□□□ 0.93
CLCA3PQ9Y6N3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms