Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBQLN1Q9UMX0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
UBQLN1Q9UMX0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 AC092068.2-201ENST00000590491 1708 ntBASIC23.93■■□□□ 1.42
UBQLN1Q9UMX0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.92■■□□□ 1.42
UBQLN1Q9UMX0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 AC126544.1-201ENST00000580842 1059 ntBASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
UBQLN1Q9UMX0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 AC010525.1-201ENST00000585559 441 ntBASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBQLN1Q9UMX0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.89■■□□□ 1.42
UBQLN1Q9UMX0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
UBQLN1Q9UMX0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 MIR935-201ENST00000401179 91 ntBASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBQLN1Q9UMX0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBQLN1Q9UMX0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBQLN1Q9UMX0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.88■■□□□ 1.41
UBQLN1Q9UMX0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
UBQLN1Q9UMX0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
UBQLN1Q9UMX0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBQLN1Q9UMX0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 AC004687.1-201ENST00000579003 1625 ntBASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.87■■□□□ 1.41
UBQLN1Q9UMX0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBQLN1Q9UMX0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.85■■□□□ 1.41
UBQLN1Q9UMX0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBQLN1Q9UMX0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms