Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSFQ9UBX1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.96■□□□□ 0.95
CTSFQ9UBX1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSFQ9UBX1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CTSFQ9UBX1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CTSFQ9UBX1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSFQ9UBX1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSFQ9UBX1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTSFQ9UBX1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSFQ9UBX1 AC126544.1-201ENST00000580842 1059 ntBASIC20.94■□□□□ 0.94
CTSFQ9UBX1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CTSFQ9UBX1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 AC010525.1-201ENST00000585559 441 ntBASIC20.93■□□□□ 0.94
CTSFQ9UBX1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
CTSFQ9UBX1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 RARRES2P6-201ENST00000567333 442 ntBASIC20.92■□□□□ 0.94
CTSFQ9UBX1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 AL353803.4-201ENST00000565882 1934 ntBASIC20.92■□□□□ 0.94
CTSFQ9UBX1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSFQ9UBX1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSFQ9UBX1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 OR2I1P-207ENST00000453522 948 ntBASIC20.9■□□□□ 0.94
CTSFQ9UBX1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSFQ9UBX1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CTSFQ9UBX1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CTSFQ9UBX1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CTSFQ9UBX1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.89■□□□□ 0.93
CTSFQ9UBX1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSFQ9UBX1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSFQ9UBX1 AC093323.1-202ENST00000635031 2045 ntBASIC20.88■□□□□ 0.93
CTSFQ9UBX1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 TSPY26P-201ENST00000476365 1326 ntBASIC20.88■□□□□ 0.93
CTSFQ9UBX1 IRS3P-201ENST00000223076 1006 ntBASIC20.88■□□□□ 0.93
CTSFQ9UBX1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.88■□□□□ 0.93
CTSFQ9UBX1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms