Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RLIMQ9NVW2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 AC127496.7-201ENST00000625110 1798 ntBASIC20.68■□□□□ 0.9
RLIMQ9NVW2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RLIMQ9NVW2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RLIMQ9NVW2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 AL353803.4-201ENST00000565882 1934 ntBASIC20.66■□□□□ 0.9
RLIMQ9NVW2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 MIR6722-201ENST00000617286 78 ntBASIC20.66■□□□□ 0.9
RLIMQ9NVW2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.66■□□□□ 0.9
RLIMQ9NVW2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RLIMQ9NVW2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 AC092028.1-203ENST00000608262 953 ntBASIC20.65■□□□□ 0.9
RLIMQ9NVW2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RLIMQ9NVW2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RLIMQ9NVW2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RLIMQ9NVW2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.64■□□□□ 0.9
RLIMQ9NVW2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 KRT125P-201ENST00000546827 989 ntBASIC20.64■□□□□ 0.89
RLIMQ9NVW2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.64■□□□□ 0.89
RLIMQ9NVW2 AC007375.3-201ENST00000600936 2314 ntBASIC20.64■□□□□ 0.89
RLIMQ9NVW2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 AC005703.6-201ENST00000623265 1329 ntBASIC20.63■□□□□ 0.89
RLIMQ9NVW2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 AC239859.2-201ENST00000444165 318 ntBASIC20.63■□□□□ 0.89
RLIMQ9NVW2 AC009299.2-201ENST00000482477 511 ntBASIC20.63■□□□□ 0.89
RLIMQ9NVW2 Z92544.1-202ENST00000571933 1220 ntBASIC20.63■□□□□ 0.89
RLIMQ9NVW2 AL451085.2-201ENST00000605085 799 ntBASIC20.63■□□□□ 0.89
RLIMQ9NVW2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RLIMQ9NVW2 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
RLIMQ9NVW2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 MIR4787-201ENST00000607364 84 ntBASIC20.62■□□□□ 0.89
RLIMQ9NVW2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RLIMQ9NVW2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms