Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC004854.2-201ENST00000608450 1441 ntBASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZFYVE28Q9HCC9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ZFYVE28Q9HCC9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.73■■□□□ 1.71
ZFYVE28Q9HCC9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 KRT19P1-201ENST00000405746 1186 ntBASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ZFYVE28Q9HCC9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.71■■□□□ 1.71
ZFYVE28Q9HCC9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.7■■□□□ 1.71
ZFYVE28Q9HCC9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.7■■□□□ 1.71
ZFYVE28Q9HCC9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
ZFYVE28Q9HCC9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ZFYVE28Q9HCC9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 GPX1P1-201ENST00000388829 606 ntBASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 CD99P1-205ENST00000527459 561 ntBASIC25.69■■□□□ 1.7
ZFYVE28Q9HCC9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZFYVE28Q9HCC9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 KRT18P11-201ENST00000435214 1283 ntBASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 AC011767.1-201ENST00000617410 1153 ntBASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZFYVE28Q9HCC9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 MIR663A-201ENST00000385250 93 ntBASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 AC066615.1-201ENST00000640911 628 ntBASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZFYVE28Q9HCC9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZFYVE28Q9HCC9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
ZFYVE28Q9HCC9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.65■■□□□ 1.7
ZFYVE28Q9HCC9 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.65■■□□□ 1.7
ZFYVE28Q9HCC9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ZFYVE28Q9HCC9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.65■■□□□ 1.7
ZFYVE28Q9HCC9 DUSP8P4-201ENST00000399538 1761 ntBASIC25.64■■□□□ 1.7
ZFYVE28Q9HCC9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
ZFYVE28Q9HCC9 BX005040.4-201ENST00000637145 1518 ntBASIC25.64■■□□□ 1.7
ZFYVE28Q9HCC9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.64■■□□□ 1.7
ZFYVE28Q9HCC9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms