Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
POPDC3Q9HBV1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
POPDC3Q9HBV1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
POPDC3Q9HBV1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
POPDC3Q9HBV1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
POPDC3Q9HBV1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
POPDC3Q9HBV1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
POPDC3Q9HBV1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 TSPY9P-201ENST00000440215 945 ntBASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 TSPY11P-201ENST00000442607 1045 ntBASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POPDC3Q9HBV1 C17orf82-201ENST00000623772 1530 ntBASIC21.86■■□□□ 1.09
POPDC3Q9HBV1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
POPDC3Q9HBV1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.86■■□□□ 1.09
POPDC3Q9HBV1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POPDC3Q9HBV1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
POPDC3Q9HBV1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 EP400NL-214ENST00000641289 2402 ntBASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 AC087742.1-201ENST00000575880 1738 ntBASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
POPDC3Q9HBV1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 MIR6724-1-201ENST00000616420 92 ntBASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 MIR6724-2-201ENST00000616483 92 ntBASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 MIR6724-4-201ENST00000617390 92 ntBASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 MIR6724-3-201ENST00000622482 92 ntBASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
POPDC3Q9HBV1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
POPDC3Q9HBV1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.83■■□□□ 1.08
POPDC3Q9HBV1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POPDC3Q9HBV1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 UNC93B8-201ENST00000511903 705 ntBASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms