Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 AC139530.1-201ENST00000575312 1977 ntBASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MAP1LC3AQ9H492 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.19■□□□□ 0.18
MAP1LC3AQ9H492 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MAP1LC3AQ9H492 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.17■□□□□ 0.18
MAP1LC3AQ9H492 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
MAP1LC3AQ9H492 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 AL022069.1-201ENST00000568025 1636 ntBASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MAP1LC3AQ9H492 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.14■□□□□ 0.18
MAP1LC3AQ9H492 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MAP1LC3AQ9H492 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MAP1LC3AQ9H492 AC090877.2-201ENST00000558441 1738 ntBASIC16.14■□□□□ 0.17
MAP1LC3AQ9H492 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
MAP1LC3AQ9H492 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MAP1LC3AQ9H492 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms