Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.17■□□□□ 0.98
BARD1Q99728 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
BARD1Q99728 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BARD1Q99728 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.16■□□□□ 0.98
BARD1Q99728 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.16■□□□□ 0.98
BARD1Q99728 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
BARD1Q99728 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BARD1Q99728 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BARD1Q99728 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BARD1Q99728 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BARD1Q99728 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BARD1Q99728 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BARD1Q99728 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.15■□□□□ 0.98
BARD1Q99728 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BARD1Q99728 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
BARD1Q99728 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BARD1Q99728 AC090877.2-201ENST00000558441 1738 ntBASIC21.15■□□□□ 0.98
BARD1Q99728 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BARD1Q99728 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
BARD1Q99728 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BARD1Q99728 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BARD1Q99728 EDA-201ENST00000338901 1233 ntBASIC21.14■□□□□ 0.97
BARD1Q99728 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BARD1Q99728 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BARD1Q99728 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BARD1Q99728 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BARD1Q99728 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.14■□□□□ 0.97
BARD1Q99728 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
BARD1Q99728 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BARD1Q99728 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BARD1Q99728 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
BARD1Q99728 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
BARD1Q99728 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
BARD1Q99728 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
BARD1Q99728 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
BARD1Q99728 AL136162.1-201ENST00000607711 1078 ntBASIC21.13■□□□□ 0.97
BARD1Q99728 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.13■□□□□ 0.97
BARD1Q99728 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.13■□□□□ 0.97
BARD1Q99728 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.13■□□□□ 0.97
BARD1Q99728 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BARD1Q99728 AC092068.2-201ENST00000590491 1708 ntBASIC21.12■□□□□ 0.97
BARD1Q99728 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BARD1Q99728 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
BARD1Q99728 AC135279.3-201ENST00000610945 1311 ntBASIC21.12■□□□□ 0.97
BARD1Q99728 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BARD1Q99728 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.12■□□□□ 0.97
BARD1Q99728 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.12■□□□□ 0.97
BARD1Q99728 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.12■□□□□ 0.97
BARD1Q99728 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BARD1Q99728 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.12■□□□□ 0.97
BARD1Q99728 AC092666.2-201ENST00000613287 246 ntBASIC21.12■□□□□ 0.97
BARD1Q99728 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
BARD1Q99728 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BARD1Q99728 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
BARD1Q99728 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.11■□□□□ 0.97
BARD1Q99728 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.11■□□□□ 0.97
BARD1Q99728 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
BARD1Q99728 AL355001.2-201ENST00000620617 1191 ntBASIC21.11■□□□□ 0.97
BARD1Q99728 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.11■□□□□ 0.97
BARD1Q99728 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
BARD1Q99728 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BARD1Q99728 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
BARD1Q99728 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.1■□□□□ 0.97
BARD1Q99728 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
BARD1Q99728 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BARD1Q99728 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms