Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.86■□□□□ 0.45
RITA1Q96K30 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.86■□□□□ 0.45
RITA1Q96K30 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.86■□□□□ 0.45
RITA1Q96K30 AL512631.2-201ENST00000604634 923 ntBASIC17.86■□□□□ 0.45
RITA1Q96K30 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.86■□□□□ 0.45
RITA1Q96K30 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RITA1Q96K30 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.86■□□□□ 0.45
RITA1Q96K30 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RITA1Q96K30 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 DUX4L4-201ENST00000566884 1269 ntBASIC17.85■□□□□ 0.45
RITA1Q96K30 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.85■□□□□ 0.45
RITA1Q96K30 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.85■□□□□ 0.45
RITA1Q96K30 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RITA1Q96K30 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RITA1Q96K30 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RITA1Q96K30 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.84■□□□□ 0.45
RITA1Q96K30 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.84■□□□□ 0.45
RITA1Q96K30 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.84■□□□□ 0.45
RITA1Q96K30 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.84■□□□□ 0.45
RITA1Q96K30 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RITA1Q96K30 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.84■□□□□ 0.45
RITA1Q96K30 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RITA1Q96K30 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RITA1Q96K30 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RITA1Q96K30 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.83■□□□□ 0.44
RITA1Q96K30 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RITA1Q96K30 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.83■□□□□ 0.44
RITA1Q96K30 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.83■□□□□ 0.44
RITA1Q96K30 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.83■□□□□ 0.44
RITA1Q96K30 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.83■□□□□ 0.44
RITA1Q96K30 MIR4466-201ENST00000606121 54 ntBASIC17.83■□□□□ 0.44
RITA1Q96K30 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.83■□□□□ 0.44
RITA1Q96K30 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.83■□□□□ 0.44
RITA1Q96K30 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.82■□□□□ 0.44
RITA1Q96K30 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RITA1Q96K30 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.82■□□□□ 0.44
RITA1Q96K30 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.82■□□□□ 0.44
RITA1Q96K30 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.82■□□□□ 0.44
RITA1Q96K30 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.82■□□□□ 0.44
RITA1Q96K30 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RITA1Q96K30 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RITA1Q96K30 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.81■□□□□ 0.44
RITA1Q96K30 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.81■□□□□ 0.44
RITA1Q96K30 AC006455.2-201ENST00000429931 906 ntBASIC17.81■□□□□ 0.44
RITA1Q96K30 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.81■□□□□ 0.44
RITA1Q96K30 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RITA1Q96K30 AC099791.2-201ENST00000605725 427 ntBASIC17.81■□□□□ 0.44
RITA1Q96K30 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.81■□□□□ 0.44
RITA1Q96K30 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RITA1Q96K30 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.81■□□□□ 0.44
RITA1Q96K30 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RITA1Q96K30 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RITA1Q96K30 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 AC233723.2-201ENST00000623798 2106 ntBASIC17.8■□□□□ 0.44
RITA1Q96K30 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.8■□□□□ 0.44
RITA1Q96K30 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.8■□□□□ 0.44
RITA1Q96K30 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.8■□□□□ 0.44
RITA1Q96K30 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.8■□□□□ 0.44
RITA1Q96K30 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.8■□□□□ 0.44
RITA1Q96K30 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RITA1Q96K30 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.8■□□□□ 0.44
RITA1Q96K30 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms