Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPG11Q96JI7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPG11Q96JI7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.02■□□□□ 0.64
SPG11Q96JI7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPG11Q96JI7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.02■□□□□ 0.63
SPG11Q96JI7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.02■□□□□ 0.63
SPG11Q96JI7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPG11Q96JI7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.02■□□□□ 0.63
SPG11Q96JI7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPG11Q96JI7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.01■□□□□ 0.63
SPG11Q96JI7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.01■□□□□ 0.63
SPG11Q96JI7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.01■□□□□ 0.63
SPG11Q96JI7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPG11Q96JI7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SPG11Q96JI7 AP004607.4-201ENST00000530158 1459 ntBASIC19.01■□□□□ 0.63
SPG11Q96JI7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19■□□□□ 0.63
SPG11Q96JI7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPG11Q96JI7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPG11Q96JI7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19■□□□□ 0.63
SPG11Q96JI7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPG11Q96JI7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SPG11Q96JI7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19■□□□□ 0.63
SPG11Q96JI7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPG11Q96JI7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19■□□□□ 0.63
SPG11Q96JI7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPG11Q96JI7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPG11Q96JI7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPG11Q96JI7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPG11Q96JI7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19■□□□□ 0.63
SPG11Q96JI7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19■□□□□ 0.63
SPG11Q96JI7 MIR6089-201ENST00000616698 64 ntBASIC19■□□□□ 0.63
SPG11Q96JI7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19■□□□□ 0.63
SPG11Q96JI7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 AC008687.6-201ENST00000596318 630 ntBASIC18.99■□□□□ 0.63
SPG11Q96JI7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPG11Q96JI7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.99■□□□□ 0.63
SPG11Q96JI7 MFSD11-216ENST00000590393 1141 ntBASIC18.99■□□□□ 0.63
SPG11Q96JI7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPG11Q96JI7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.98■□□□□ 0.63
SPG11Q96JI7 KRT18P11-201ENST00000435214 1283 ntBASIC18.98■□□□□ 0.63
SPG11Q96JI7 AL499627.2-201ENST00000606283 725 ntBASIC18.98■□□□□ 0.63
SPG11Q96JI7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPG11Q96JI7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPG11Q96JI7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.97■□□□□ 0.63
SPG11Q96JI7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.96■□□□□ 0.63
SPG11Q96JI7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.96■□□□□ 0.63
SPG11Q96JI7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.96■□□□□ 0.63
SPG11Q96JI7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 ALDH1A3-203ENST00000557963 1670 ntBASIC18.96■□□□□ 0.63
SPG11Q96JI7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.96■□□□□ 0.63
SPG11Q96JI7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.96■□□□□ 0.63
SPG11Q96JI7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.96■□□□□ 0.63
SPG11Q96JI7 MIR4651-201ENST00000582622 73 ntBASIC18.96■□□□□ 0.63
SPG11Q96JI7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPG11Q96JI7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPG11Q96JI7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SPG11Q96JI7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPG11Q96JI7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms