Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 MIR4767-201ENST00000582827 78 ntBASIC19.67■□□□□ 0.74
APH1AQ96BI3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.67■□□□□ 0.74
APH1AQ96BI3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APH1AQ96BI3 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
APH1AQ96BI3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 MIR638-201ENST00000385237 100 ntBASIC19.66■□□□□ 0.74
APH1AQ96BI3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.66■□□□□ 0.74
APH1AQ96BI3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APH1AQ96BI3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
APH1AQ96BI3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
APH1AQ96BI3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.65■□□□□ 0.74
APH1AQ96BI3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 EDA-201ENST00000338901 1233 ntBASIC19.65■□□□□ 0.74
APH1AQ96BI3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.65■□□□□ 0.74
APH1AQ96BI3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
APH1AQ96BI3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APH1AQ96BI3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
APH1AQ96BI3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APH1AQ96BI3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
APH1AQ96BI3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.64■□□□□ 0.73
APH1AQ96BI3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.64■□□□□ 0.73
APH1AQ96BI3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
APH1AQ96BI3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
APH1AQ96BI3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APH1AQ96BI3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.63■□□□□ 0.73
APH1AQ96BI3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 AL355001.2-201ENST00000620617 1191 ntBASIC19.63■□□□□ 0.73
APH1AQ96BI3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.63■□□□□ 0.73
APH1AQ96BI3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APH1AQ96BI3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.62■□□□□ 0.73
APH1AQ96BI3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APH1AQ96BI3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.62■□□□□ 0.73
APH1AQ96BI3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.62■□□□□ 0.73
APH1AQ96BI3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APH1AQ96BI3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.62■□□□□ 0.73
APH1AQ96BI3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.62■□□□□ 0.73
APH1AQ96BI3 AC005837.3-201ENST00000612163 286 ntBASIC19.62■□□□□ 0.73
APH1AQ96BI3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APH1AQ96BI3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APH1AQ96BI3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APH1AQ96BI3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
APH1AQ96BI3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APH1AQ96BI3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
APH1AQ96BI3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.61■□□□□ 0.73
APH1AQ96BI3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.61■□□□□ 0.73
APH1AQ96BI3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
APH1AQ96BI3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
APH1AQ96BI3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms