Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS1Q92902 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.1■□□□□ 0.81
HPS1Q92902 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.09■□□□□ 0.81
HPS1Q92902 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HPS1Q92902 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.09■□□□□ 0.81
HPS1Q92902 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS1Q92902 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HPS1Q92902 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HPS1Q92902 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HPS1Q92902 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HPS1Q92902 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HPS1Q92902 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.08■□□□□ 0.81
HPS1Q92902 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HPS1Q92902 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
HPS1Q92902 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HPS1Q92902 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HPS1Q92902 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HPS1Q92902 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HPS1Q92902 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.07■□□□□ 0.8
HPS1Q92902 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS1Q92902 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS1Q92902 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.07■□□□□ 0.8
HPS1Q92902 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.07■□□□□ 0.8
HPS1Q92902 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.07■□□□□ 0.8
HPS1Q92902 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.07■□□□□ 0.8
HPS1Q92902 Z92544.1-202ENST00000571933 1220 ntBASIC20.07■□□□□ 0.8
HPS1Q92902 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS1Q92902 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS1Q92902 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS1Q92902 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS1Q92902 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HPS1Q92902 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HPS1Q92902 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HPS1Q92902 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.06■□□□□ 0.8
HPS1Q92902 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HPS1Q92902 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HPS1Q92902 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS1Q92902 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.05■□□□□ 0.8
HPS1Q92902 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HPS1Q92902 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS1Q92902 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS1Q92902 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HPS1Q92902 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HPS1Q92902 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HPS1Q92902 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HPS1Q92902 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HPS1Q92902 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HPS1Q92902 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPS1Q92902 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HPS1Q92902 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS1Q92902 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HPS1Q92902 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPS1Q92902 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HPS1Q92902 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS1Q92902 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HPS1Q92902 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HPS1Q92902 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.03■□□□□ 0.8
HPS1Q92902 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.03■□□□□ 0.8
HPS1Q92902 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.03■□□□□ 0.8
HPS1Q92902 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPS1Q92902 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS1Q92902 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS1Q92902 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS1Q92902 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPS1Q92902 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPS1Q92902 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
HPS1Q92902 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.02■□□□□ 0.8
HPS1Q92902 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPS1Q92902 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.02■□□□□ 0.79
HPS1Q92902 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPS1Q92902 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.02■□□□□ 0.79
HPS1Q92902 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HPS1Q92902 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPS1Q92902 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms