Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM9SF4Q92544 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM9SF4Q92544 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF4Q92544 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF4Q92544 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.88■□□□□ 0.93
TM9SF4Q92544 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF4Q92544 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF4Q92544 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.88■□□□□ 0.93
TM9SF4Q92544 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF4Q92544 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.88■□□□□ 0.93
TM9SF4Q92544 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
TM9SF4Q92544 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
TM9SF4Q92544 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.87■□□□□ 0.93
TM9SF4Q92544 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
TM9SF4Q92544 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TM9SF4Q92544 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF4Q92544 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF4Q92544 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF4Q92544 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.86■□□□□ 0.93
TM9SF4Q92544 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.86■□□□□ 0.93
TM9SF4Q92544 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.86■□□□□ 0.93
TM9SF4Q92544 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.86■□□□□ 0.93
TM9SF4Q92544 AC233992.3-201ENST00000607491 485 ntBASIC20.86■□□□□ 0.93
TM9SF4Q92544 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.86■□□□□ 0.93
TM9SF4Q92544 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF4Q92544 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF4Q92544 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.86■□□□□ 0.93
TM9SF4Q92544 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF4Q92544 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF4Q92544 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF4Q92544 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.85■□□□□ 0.93
TM9SF4Q92544 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 CLDN5-201ENST00000403084 2357 ntBASIC20.85■□□□□ 0.93
TM9SF4Q92544 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF4Q92544 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF4Q92544 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF4Q92544 BX842568.3-201ENST00000418104 571 ntBASIC20.85■□□□□ 0.93
TM9SF4Q92544 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.85■□□□□ 0.93
TM9SF4Q92544 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF4Q92544 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF4Q92544 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TM9SF4Q92544 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.84■□□□□ 0.93
TM9SF4Q92544 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF4Q92544 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.84■□□□□ 0.93
TM9SF4Q92544 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
TM9SF4Q92544 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF4Q92544 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF4Q92544 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF4Q92544 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF4Q92544 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF4Q92544 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.83■□□□□ 0.93
TM9SF4Q92544 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF4Q92544 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.83■□□□□ 0.92
TM9SF4Q92544 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM9SF4Q92544 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TM9SF4Q92544 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM9SF4Q92544 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF4Q92544 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF4Q92544 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF4Q92544 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.82■□□□□ 0.92
TM9SF4Q92544 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.82■□□□□ 0.92
TM9SF4Q92544 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.82■□□□□ 0.92
TM9SF4Q92544 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF4Q92544 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.81■□□□□ 0.92
TM9SF4Q92544 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.81■□□□□ 0.92
TM9SF4Q92544 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF4Q92544 MIR3181-201ENST00000578512 73 ntBASIC20.81■□□□□ 0.92
TM9SF4Q92544 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms