Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDDC2Q7Z4H3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDDC2Q7Z4H3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HDDC2Q7Z4H3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
HDDC2Q7Z4H3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.08■□□□□ 0.8
HDDC2Q7Z4H3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.08■□□□□ 0.8
HDDC2Q7Z4H3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 AC239859.2-201ENST00000444165 318 ntBASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDDC2Q7Z4H3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 AL451085.2-201ENST00000605085 799 ntBASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 AL121603.2-201ENST00000557373 2117 ntBASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDDC2Q7Z4H3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.05■□□□□ 0.8
HDDC2Q7Z4H3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDDC2Q7Z4H3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDDC2Q7Z4H3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HDDC2Q7Z4H3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDDC2Q7Z4H3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDDC2Q7Z4H3 AC010997.5-201ENST00000609182 354 ntBASIC20.02■□□□□ 0.8
HDDC2Q7Z4H3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms