Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF44Q7L0R7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.29■■□□□ 1
RNF44Q7L0R7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.29■■□□□ 1
RNF44Q7L0R7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF44Q7L0R7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF44Q7L0R7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF44Q7L0R7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF44Q7L0R7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.28■■□□□ 1
RNF44Q7L0R7 EDA-201ENST00000338901 1233 ntBASIC21.28■■□□□ 1
RNF44Q7L0R7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.28■■□□□ 1
RNF44Q7L0R7 AL031432.3-201ENST00000607698 485 ntBASIC21.28■■□□□ 1
RNF44Q7L0R7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RNF44Q7L0R7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.28■■□□□ 1
RNF44Q7L0R7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF44Q7L0R7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.28■■□□□ 1
RNF44Q7L0R7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF44Q7L0R7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF44Q7L0R7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF44Q7L0R7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.28■■□□□ 1
RNF44Q7L0R7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF44Q7L0R7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.27■■□□□ 1
RNF44Q7L0R7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RNF44Q7L0R7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF44Q7L0R7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF44Q7L0R7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.27■■□□□ 1
RNF44Q7L0R7 AC133637.1-201ENST00000624115 1537 ntBASIC21.27■■□□□ 1
RNF44Q7L0R7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF44Q7L0R7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RNF44Q7L0R7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF44Q7L0R7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RNF44Q7L0R7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF44Q7L0R7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF44Q7L0R7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF44Q7L0R7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 AC005837.3-201ENST00000612163 286 ntBASIC21.24■□□□□ 0.99
RNF44Q7L0R7 AL355001.2-201ENST00000620617 1191 ntBASIC21.24■□□□□ 0.99
RNF44Q7L0R7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF44Q7L0R7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.23■□□□□ 0.99
RNF44Q7L0R7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF44Q7L0R7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 AP001330.3-201ENST00000520123 633 ntBASIC21.22■□□□□ 0.99
RNF44Q7L0R7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF44Q7L0R7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF44Q7L0R7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms