Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE1AP54750 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.24■■□□□ 1.95
PDE1AP54750 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE1AP54750 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.23■■□□□ 1.95
PDE1AP54750 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PDE1AP54750 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE1AP54750 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE1AP54750 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.23■■□□□ 1.95
PDE1AP54750 AL512631.2-201ENST00000604634 923 ntBASIC27.23■■□□□ 1.95
PDE1AP54750 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.23■■□□□ 1.95
PDE1AP54750 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
PDE1AP54750 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.23■■□□□ 1.95
PDE1AP54750 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE1AP54750 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE1AP54750 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 AC233723.2-201ENST00000623798 2106 ntBASIC27.22■■□□□ 1.95
PDE1AP54750 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.22■■□□□ 1.95
PDE1AP54750 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDE1AP54750 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.22■■□□□ 1.95
PDE1AP54750 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PDE1AP54750 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDE1AP54750 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.21■■□□□ 1.95
PDE1AP54750 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.21■■□□□ 1.95
PDE1AP54750 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.21■■□□□ 1.95
PDE1AP54750 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDE1AP54750 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
PDE1AP54750 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.21■■□□□ 1.95
PDE1AP54750 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.2■■□□□ 1.95
PDE1AP54750 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.2■■□□□ 1.95
PDE1AP54750 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PDE1AP54750 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PDE1AP54750 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.2■■□□□ 1.94
PDE1AP54750 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PDE1AP54750 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PDE1AP54750 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.2■■□□□ 1.94
PDE1AP54750 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.19■■□□□ 1.94
PDE1AP54750 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
PDE1AP54750 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.19■■□□□ 1.94
PDE1AP54750 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.19■■□□□ 1.94
PDE1AP54750 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
PDE1AP54750 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE1AP54750 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.18■■□□□ 1.94
PDE1AP54750 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.18■■□□□ 1.94
PDE1AP54750 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE1AP54750 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PDE1AP54750 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.17■■□□□ 1.94
PDE1AP54750 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.17■■□□□ 1.94
PDE1AP54750 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDE1AP54750 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.17■■□□□ 1.94
PDE1AP54750 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.17■■□□□ 1.94
PDE1AP54750 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.17■■□□□ 1.94
PDE1AP54750 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDE1AP54750 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PDE1AP54750 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.16■■□□□ 1.94
PDE1AP54750 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.16■■□□□ 1.94
PDE1AP54750 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.16■■□□□ 1.94
PDE1AP54750 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
PDE1AP54750 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.16■■□□□ 1.94
PDE1AP54750 AC009086.3-201ENST00000623486 1008 ntBASIC27.16■■□□□ 1.94
PDE1AP54750 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.16■■□□□ 1.94
PDE1AP54750 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.16■■□□□ 1.94
PDE1AP54750 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
PDE1AP54750 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE1AP54750 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
PDE1AP54750 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms