Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC105265.2-201ENST00000467189 838 ntBASIC21.09■□□□□ 0.97
MMP11P24347 AC027682.1-201ENST00000562846 899 ntBASIC21.09■□□□□ 0.97
MMP11P24347 MIR3181-201ENST00000578512 73 ntBASIC21.09■□□□□ 0.97
MMP11P24347 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.09■□□□□ 0.97
MMP11P24347 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP11P24347 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP11P24347 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
MMP11P24347 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
MMP11P24347 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP11P24347 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP11P24347 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP11P24347 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP11P24347 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.08■□□□□ 0.97
MMP11P24347 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.08■□□□□ 0.97
MMP11P24347 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.08■□□□□ 0.97
MMP11P24347 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP11P24347 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
MMP11P24347 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MMP11P24347 RASA4CP-201ENST00000424092 1398 ntBASIC21.08■□□□□ 0.96
MMP11P24347 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MMP11P24347 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP11P24347 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP11P24347 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP11P24347 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP11P24347 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP11P24347 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP11P24347 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP11P24347 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MMP11P24347 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP11P24347 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP11P24347 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.06■□□□□ 0.96
MMP11P24347 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.06■□□□□ 0.96
MMP11P24347 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP11P24347 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.06■□□□□ 0.96
MMP11P24347 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
MMP11P24347 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP11P24347 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP11P24347 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP11P24347 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MMP11P24347 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.05■□□□□ 0.96
MMP11P24347 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.05■□□□□ 0.96
MMP11P24347 CA15P2-201ENST00000611168 834 ntBASIC21.05■□□□□ 0.96
MMP11P24347 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP11P24347 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MMP11P24347 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.05■□□□□ 0.96
MMP11P24347 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MMP11P24347 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MMP11P24347 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MMP11P24347 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP11P24347 AC008764.7-201ENST00000593779 1081 ntBASIC21.04■□□□□ 0.96
MMP11P24347 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MMP11P24347 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.04■□□□□ 0.96
MMP11P24347 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MMP11P24347 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP11P24347 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP11P24347 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP11P24347 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
MMP11P24347 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP11P24347 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP11P24347 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.03■□□□□ 0.96
MMP11P24347 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
MMP11P24347 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP11P24347 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP11P24347 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MMP11P24347 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP11P24347 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP11P24347 pRNA.6-201ENST00000610482 90 ntBASIC21.02■□□□□ 0.96
MMP11P24347 pRNA.5-201ENST00000612139 90 ntBASIC21.02■□□□□ 0.96
MMP11P24347 pRNA.11-201ENST00000618423 90 ntBASIC21.02■□□□□ 0.96
MMP11P24347 pRNA.13-201ENST00000619112 90 ntBASIC21.02■□□□□ 0.96
MMP11P24347 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.02■□□□□ 0.96
MMP11P24347 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms