Protein–RNA interactions for Protein: P22061

PCMT1, Protein-L-isoaspartate(D-aspartate) O-methyltransferase, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1P22061 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.28■□□□□ 0.84
PCMT1P22061 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCMT1P22061 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCMT1P22061 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCMT1P22061 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCMT1P22061 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCMT1P22061 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCMT1P22061 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCMT1P22061 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCMT1P22061 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCMT1P22061 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCMT1P22061 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
PCMT1P22061 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCMT1P22061 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCMT1P22061 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCMT1P22061 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.26■□□□□ 0.83
PCMT1P22061 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.26■□□□□ 0.83
PCMT1P22061 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCMT1P22061 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.26■□□□□ 0.83
PCMT1P22061 AC080038.3-201ENST00000623346 1952 ntBASIC20.26■□□□□ 0.83
PCMT1P22061 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.26■□□□□ 0.83
PCMT1P22061 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCMT1P22061 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.25■□□□□ 0.83
PCMT1P22061 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.25■□□□□ 0.83
PCMT1P22061 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PCMT1P22061 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCMT1P22061 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCMT1P22061 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCMT1P22061 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCMT1P22061 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCMT1P22061 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.24■□□□□ 0.83
PCMT1P22061 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCMT1P22061 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCMT1P22061 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.24■□□□□ 0.83
PCMT1P22061 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
PCMT1P22061 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCMT1P22061 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCMT1P22061 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCMT1P22061 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCMT1P22061 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCMT1P22061 AL451085.2-201ENST00000605085 799 ntBASIC20.23■□□□□ 0.83
PCMT1P22061 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCMT1P22061 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCMT1P22061 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PCMT1P22061 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.22■□□□□ 0.83
PCMT1P22061 AC010980.1-201ENST00000587192 1142 ntBASIC20.22■□□□□ 0.83
PCMT1P22061 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCMT1P22061 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCMT1P22061 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCMT1P22061 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCMT1P22061 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.21■□□□□ 0.83
PCMT1P22061 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.21■□□□□ 0.83
PCMT1P22061 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCMT1P22061 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.21■□□□□ 0.83
PCMT1P22061 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.21■□□□□ 0.83
PCMT1P22061 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCMT1P22061 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.21■□□□□ 0.83
PCMT1P22061 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCMT1P22061 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms