Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.8■■□□□ 1.4
RB1P06400 AC073111.5-205ENST00000641717 521 ntBASIC23.8■■□□□ 1.4
RB1P06400 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.8■■□□□ 1.4
RB1P06400 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.8■■□□□ 1.4
RB1P06400 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.8■■□□□ 1.4
RB1P06400 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.79■■□□□ 1.4
RB1P06400 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RB1P06400 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RB1P06400 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.79■■□□□ 1.4
RB1P06400 KRT18P61-201ENST00000585825 1298 ntBASIC23.79■■□□□ 1.4
RB1P06400 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RB1P06400 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RB1P06400 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RB1P06400 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.79■■□□□ 1.4
RB1P06400 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RB1P06400 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.78■■□□□ 1.4
RB1P06400 AC026185.1-201ENST00000445748 174 ntBASIC23.78■■□□□ 1.4
RB1P06400 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.78■■□□□ 1.4
RB1P06400 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.78■■□□□ 1.4
RB1P06400 TPRG1LP1-201ENST00000598702 760 ntBASIC23.78■■□□□ 1.4
RB1P06400 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.78■■□□□ 1.4
RB1P06400 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RB1P06400 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RB1P06400 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.78■■□□□ 1.4
RB1P06400 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RB1P06400 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RB1P06400 LINC01529-204ENST00000636474 1715 ntBASIC23.77■■□□□ 1.4
RB1P06400 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.77■■□□□ 1.4
RB1P06400 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.77■■□□□ 1.4
RB1P06400 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.77■■□□□ 1.4
RB1P06400 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RB1P06400 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.77■■□□□ 1.4
RB1P06400 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.76■■□□□ 1.39
RB1P06400 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.76■■□□□ 1.39
RB1P06400 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.76■■□□□ 1.39
RB1P06400 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.76■■□□□ 1.39
RB1P06400 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.76■■□□□ 1.39
RB1P06400 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RB1P06400 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.75■■□□□ 1.39
RB1P06400 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RB1P06400 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RB1P06400 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RB1P06400 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.75■■□□□ 1.39
RB1P06400 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.75■■□□□ 1.39
RB1P06400 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RB1P06400 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RB1P06400 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.75■■□□□ 1.39
RB1P06400 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RB1P06400 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.74■■□□□ 1.39
RB1P06400 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RB1P06400 AC144652.1-201ENST00000609974 1624 ntBASIC23.74■■□□□ 1.39
RB1P06400 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RB1P06400 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.74■■□□□ 1.39
RB1P06400 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RB1P06400 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.74■■□□□ 1.39
RB1P06400 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.74■■□□□ 1.39
RB1P06400 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.74■■□□□ 1.39
RB1P06400 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.74■■□□□ 1.39
RB1P06400 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.74■■□□□ 1.39
RB1P06400 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RB1P06400 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.74■■□□□ 1.39
RB1P06400 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.74■■□□□ 1.39
RB1P06400 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RB1P06400 AP004607.4-201ENST00000530158 1459 ntBASIC23.74■■□□□ 1.39
RB1P06400 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.73■■□□□ 1.39
RB1P06400 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RB1P06400 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RB1P06400 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.73■■□□□ 1.39
RB1P06400 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.73■■□□□ 1.39
RB1P06400 BID-214ENST00000617586 542 ntTSL 5 BASIC23.73■■□□□ 1.39
RB1P06400 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RB1P06400 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RB1P06400 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RB1P06400 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
RB1P06400 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RB1P06400 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RB1P06400 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RB1P06400 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RB1P06400 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RB1P06400 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.72■■□□□ 1.39
RB1P06400 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RB1P06400 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RB1P06400 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RB1P06400 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RB1P06400 AC104771.1-201ENST00000603335 964 ntBASIC23.71■■□□□ 1.39
RB1P06400 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RB1P06400 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RB1P06400 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms