Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.71■□□□□ 0.58
HLA-AP01891 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HLA-AP01891 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-AP01891 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-AP01891 AC090877.2-201ENST00000558441 1738 ntBASIC18.7■□□□□ 0.58
HLA-AP01891 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 AC093536.1-201ENST00000569153 554 ntBASIC18.7■□□□□ 0.58
HLA-AP01891 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-AP01891 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
HLA-AP01891 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-AP01891 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-AP01891 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HLA-AP01891 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-AP01891 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-AP01891 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-AP01891 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-AP01891 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-AP01891 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-AP01891 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-AP01891 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-AP01891 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-AP01891 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-AP01891 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HLA-AP01891 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-AP01891 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.68■□□□□ 0.58
HLA-AP01891 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-AP01891 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-AP01891 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-AP01891 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.67■□□□□ 0.58
HLA-AP01891 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-AP01891 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-AP01891 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-AP01891 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HLA-AP01891 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-AP01891 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-AP01891 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-AP01891 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-AP01891 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-AP01891 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-AP01891 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
HLA-AP01891 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-AP01891 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HLA-AP01891 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-AP01891 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-AP01891 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-AP01891 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-AP01891 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-AP01891 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-AP01891 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HLA-AP01891 AL022069.1-201ENST00000568025 1636 ntBASIC18.65■□□□□ 0.58
HLA-AP01891 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-AP01891 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-AP01891 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-AP01891 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-AP01891 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-AP01891 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-AP01891 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HLA-AP01891 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-AP01891 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-AP01891 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-AP01891 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-AP01891 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.64■□□□□ 0.57
HLA-AP01891 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-AP01891 AC026310.3-201ENST00000625186 2373 ntBASIC18.64■□□□□ 0.57
HLA-AP01891 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HLA-AP01891 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-AP01891 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-AP01891 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HLA-AP01891 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-AP01891 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-AP01891 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-AP01891 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-AP01891 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.63■□□□□ 0.57
HLA-AP01891 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HLA-AP01891 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms