Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PMPCBO75439 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMPCBO75439 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.54■■□□□ 1.2
PMPCBO75439 C1orf229-201ENST00000623686 2258 ntBASIC22.54■■□□□ 1.2
PMPCBO75439 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.54■■□□□ 1.2
PMPCBO75439 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.54■■□□□ 1.2
PMPCBO75439 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.54■■□□□ 1.2
PMPCBO75439 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PMPCBO75439 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.54■■□□□ 1.2
PMPCBO75439 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.54■■□□□ 1.2
PMPCBO75439 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMPCBO75439 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PMPCBO75439 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
PMPCBO75439 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.53■■□□□ 1.2
PMPCBO75439 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.53■■□□□ 1.2
PMPCBO75439 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.53■■□□□ 1.2
PMPCBO75439 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.53■■□□□ 1.2
PMPCBO75439 DUX4L4-201ENST00000566884 1269 ntBASIC22.53■■□□□ 1.2
PMPCBO75439 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.53■■□□□ 1.2
PMPCBO75439 AL512631.2-201ENST00000604634 923 ntBASIC22.53■■□□□ 1.2
PMPCBO75439 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.53■■□□□ 1.2
PMPCBO75439 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PMPCBO75439 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.53■■□□□ 1.2
PMPCBO75439 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.53■■□□□ 1.2
PMPCBO75439 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.53■■□□□ 1.2
PMPCBO75439 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PMPCBO75439 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.52■■□□□ 1.2
PMPCBO75439 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.52■■□□□ 1.2
PMPCBO75439 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PMPCBO75439 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PMPCBO75439 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.52■■□□□ 1.2
PMPCBO75439 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.52■■□□□ 1.2
PMPCBO75439 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PMPCBO75439 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PMPCBO75439 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.52■■□□□ 1.2
PMPCBO75439 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.52■■□□□ 1.2
PMPCBO75439 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PMPCBO75439 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PMPCBO75439 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.51■■□□□ 1.19
PMPCBO75439 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMPCBO75439 AC131212.1-201ENST00000613771 668 ntBASIC22.51■■□□□ 1.19
PMPCBO75439 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMPCBO75439 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PMPCBO75439 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PMPCBO75439 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.5■■□□□ 1.19
PMPCBO75439 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.5■■□□□ 1.19
PMPCBO75439 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMPCBO75439 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMPCBO75439 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PMPCBO75439 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMPCBO75439 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.5■■□□□ 1.19
PMPCBO75439 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMPCBO75439 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PMPCBO75439 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PMPCBO75439 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.5■■□□□ 1.19
PMPCBO75439 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.5■■□□□ 1.19
PMPCBO75439 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.5■■□□□ 1.19
PMPCBO75439 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PMPCBO75439 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.49■■□□□ 1.19
PMPCBO75439 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.49■■□□□ 1.19
PMPCBO75439 AC012676.1-201ENST00000574705 1949 ntBASIC22.49■■□□□ 1.19
PMPCBO75439 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PMPCBO75439 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PMPCBO75439 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.49■■□□□ 1.19
PMPCBO75439 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.49■■□□□ 1.19
PMPCBO75439 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PMPCBO75439 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PMPCBO75439 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.49■■□□□ 1.19
PMPCBO75439 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PMPCBO75439 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.48■■□□□ 1.19
PMPCBO75439 AC131281.2-201ENST00000520478 145 ntBASIC22.48■■□□□ 1.19
PMPCBO75439 AC099791.2-201ENST00000605725 427 ntBASIC22.48■■□□□ 1.19
PMPCBO75439 MIR4466-201ENST00000606121 54 ntBASIC22.48■■□□□ 1.19
PMPCBO75439 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PMPCBO75439 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.48■■□□□ 1.19
PMPCBO75439 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.48■■□□□ 1.19
PMPCBO75439 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PMPCBO75439 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PMPCBO75439 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PMPCBO75439 SRD5A1P1-201ENST00000442297 786 ntBASIC22.47■■□□□ 1.19
PMPCBO75439 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.47■■□□□ 1.19
PMPCBO75439 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PMPCBO75439 AC009086.3-201ENST00000623486 1008 ntBASIC22.47■■□□□ 1.19
PMPCBO75439 AC241377.3-202ENST00000626088 1088 ntBASIC22.47■■□□□ 1.19
PMPCBO75439 AC241585.3-202ENST00000628937 1088 ntBASIC22.47■■□□□ 1.19
PMPCBO75439 AC245100.8-202ENST00000629247 1058 ntBASIC22.47■■□□□ 1.19
PMPCBO75439 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PMPCBO75439 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.47■■□□□ 1.19
PMPCBO75439 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PMPCBO75439 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PMPCBO75439 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms