Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PFDN1O60925 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PFDN1O60925 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.95■□□□□ 0.78
PFDN1O60925 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PFDN1O60925 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PFDN1O60925 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PFDN1O60925 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PFDN1O60925 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PFDN1O60925 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.94■□□□□ 0.78
PFDN1O60925 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.94■□□□□ 0.78
PFDN1O60925 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PFDN1O60925 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN1O60925 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN1O60925 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN1O60925 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN1O60925 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PFDN1O60925 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PFDN1O60925 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PFDN1O60925 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN1O60925 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.93■□□□□ 0.78
PFDN1O60925 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN1O60925 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PFDN1O60925 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PFDN1O60925 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 AC092053.2-201ENST00000640557 1818 ntBASIC19.92■□□□□ 0.78
PFDN1O60925 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
PFDN1O60925 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN1O60925 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.91■□□□□ 0.78
PFDN1O60925 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PFDN1O60925 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PFDN1O60925 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.91■□□□□ 0.78
PFDN1O60925 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN1O60925 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PFDN1O60925 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PFDN1O60925 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PFDN1O60925 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.9■□□□□ 0.78
PFDN1O60925 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PFDN1O60925 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PFDN1O60925 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.9■□□□□ 0.78
PFDN1O60925 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN1O60925 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.89■□□□□ 0.78
PFDN1O60925 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PFDN1O60925 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PFDN1O60925 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PFDN1O60925 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.89■□□□□ 0.77
PFDN1O60925 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
PFDN1O60925 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.88■□□□□ 0.77
PFDN1O60925 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.88■□□□□ 0.77
PFDN1O60925 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 AC092068.2-201ENST00000590491 1708 ntBASIC19.88■□□□□ 0.77
PFDN1O60925 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PFDN1O60925 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.88■□□□□ 0.77
PFDN1O60925 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms