Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIPK2O43353 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
RIPK2O43353 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIPK2O43353 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIPK2O43353 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIPK2O43353 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RIPK2O43353 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.61■■□□□ 1.21
RIPK2O43353 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.61■■□□□ 1.21
RIPK2O43353 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.61■■□□□ 1.21
RIPK2O43353 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RIPK2O43353 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RIPK2O43353 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RIPK2O43353 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.6■■□□□ 1.21
RIPK2O43353 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.6■■□□□ 1.21
RIPK2O43353 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.6■■□□□ 1.21
RIPK2O43353 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RIPK2O43353 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RIPK2O43353 AC022616.5-201ENST00000518796 181 ntBASIC22.6■■□□□ 1.21
RIPK2O43353 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.6■■□□□ 1.21
RIPK2O43353 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.6■■□□□ 1.21
RIPK2O43353 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.6■■□□□ 1.21
RIPK2O43353 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.6■■□□□ 1.21
RIPK2O43353 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RIPK2O43353 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 AF131216.4-201ENST00000638924 1588 ntBASIC22.59■■□□□ 1.21
RIPK2O43353 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RIPK2O43353 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.59■■□□□ 1.21
RIPK2O43353 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIPK2O43353 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RIPK2O43353 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.58■■□□□ 1.21
RIPK2O43353 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 AC129492.7-201ENST00000622992 756 ntBASIC22.58■■□□□ 1.21
RIPK2O43353 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.58■■□□□ 1.21
RIPK2O43353 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RIPK2O43353 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
RIPK2O43353 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIPK2O43353 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RIPK2O43353 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.57■■□□□ 1.2
RIPK2O43353 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.57■■□□□ 1.2
RIPK2O43353 AC019171.1-201ENST00000601251 1056 ntBASIC22.57■■□□□ 1.2
RIPK2O43353 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RIPK2O43353 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.57■■□□□ 1.2
RIPK2O43353 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.57■■□□□ 1.2
RIPK2O43353 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIPK2O43353 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RIPK2O43353 AC026310.3-201ENST00000625186 2373 ntBASIC22.56■■□□□ 1.2
RIPK2O43353 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIPK2O43353 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.56■■□□□ 1.2
RIPK2O43353 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIPK2O43353 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RIPK2O43353 AC004448.1-201ENST00000458332 883 ntBASIC22.56■■□□□ 1.2
RIPK2O43353 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RIPK2O43353 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIPK2O43353 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIPK2O43353 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIPK2O43353 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RIPK2O43353 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.55■■□□□ 1.2
RIPK2O43353 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.55■■□□□ 1.2
RIPK2O43353 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.55■■□□□ 1.2
RIPK2O43353 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIPK2O43353 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.55■■□□□ 1.2
RIPK2O43353 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.55■■□□□ 1.2
RIPK2O43353 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.55■■□□□ 1.2
RIPK2O43353 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.55■■□□□ 1.2
RIPK2O43353 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
RIPK2O43353 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIPK2O43353 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIPK2O43353 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RIPK2O43353 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.55■■□□□ 1.2
RIPK2O43353 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIPK2O43353 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RIPK2O43353 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIPK2O43353 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RIPK2O43353 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RIPK2O43353 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.54■■□□□ 1.2
RIPK2O43353 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIPK2O43353 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.54■■□□□ 1.2
RIPK2O43353 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIPK2O43353 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIPK2O43353 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.53■■□□□ 1.2
RIPK2O43353 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIPK2O43353 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIPK2O43353 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.53■■□□□ 1.2
RIPK2O43353 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIPK2O43353 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIPK2O43353 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIPK2O43353 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms