Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN4O14817 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN4O14817 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN4O14817 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN4O14817 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.48■□□□□ 0.55
TSPAN4O14817 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN4O14817 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN4O14817 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN4O14817 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN4O14817 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN4O14817 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TSPAN4O14817 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN4O14817 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TSPAN4O14817 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.47■□□□□ 0.55
TSPAN4O14817 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.47■□□□□ 0.55
TSPAN4O14817 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 SMPD5-203ENST00000639008 1464 ntBASIC18.47■□□□□ 0.55
TSPAN4O14817 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN4O14817 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN4O14817 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN4O14817 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.46■□□□□ 0.55
TSPAN4O14817 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 RARRES2P2-201ENST00000394842 485 ntBASIC18.46■□□□□ 0.55
TSPAN4O14817 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN4O14817 AC025884.2-201ENST00000553429 711 ntBASIC18.46■□□□□ 0.55
TSPAN4O14817 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN4O14817 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TSPAN4O14817 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN4O14817 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN4O14817 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN4O14817 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN4O14817 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN4O14817 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN4O14817 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TSPAN4O14817 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.44■□□□□ 0.54
TSPAN4O14817 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.44■□□□□ 0.54
TSPAN4O14817 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN4O14817 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN4O14817 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN4O14817 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN4O14817 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN4O14817 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TSPAN4O14817 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN4O14817 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.43■□□□□ 0.54
TSPAN4O14817 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN4O14817 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TSPAN4O14817 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.42■□□□□ 0.54
TSPAN4O14817 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 MIR3960-201ENST00000583311 91 ntBASIC18.42■□□□□ 0.54
TSPAN4O14817 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.42■□□□□ 0.54
TSPAN4O14817 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TSPAN4O14817 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TSPAN4O14817 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN4O14817 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TSPAN4O14817 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms