Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCAO00442 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCAO00442 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTCAO00442 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RTCAO00442 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTCAO00442 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.2■□□□□ 0.98
RTCAO00442 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTCAO00442 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.2■□□□□ 0.98
RTCAO00442 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RTCAO00442 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.19■□□□□ 0.98
RTCAO00442 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.19■□□□□ 0.98
RTCAO00442 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCAO00442 AC131212.1-201ENST00000613771 668 ntBASIC21.19■□□□□ 0.98
RTCAO00442 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTCAO00442 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RTCAO00442 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 DUX4L4-201ENST00000566884 1269 ntBASIC21.18■□□□□ 0.98
RTCAO00442 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.18■□□□□ 0.98
RTCAO00442 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.18■□□□□ 0.98
RTCAO00442 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.18■□□□□ 0.98
RTCAO00442 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCAO00442 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.17■□□□□ 0.98
RTCAO00442 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.17■□□□□ 0.98
RTCAO00442 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.17■□□□□ 0.98
RTCAO00442 MIR4466-201ENST00000606121 54 ntBASIC21.17■□□□□ 0.98
RTCAO00442 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.17■□□□□ 0.98
RTCAO00442 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.17■□□□□ 0.98
RTCAO00442 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCAO00442 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCAO00442 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCAO00442 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RTCAO00442 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCAO00442 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCAO00442 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCAO00442 AC131281.2-201ENST00000520478 145 ntBASIC21.16■□□□□ 0.98
RTCAO00442 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RTCAO00442 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.16■□□□□ 0.98
RTCAO00442 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.16■□□□□ 0.98
RTCAO00442 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.15■□□□□ 0.98
RTCAO00442 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
RTCAO00442 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.15■□□□□ 0.98
RTCAO00442 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
RTCAO00442 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 AC006455.2-201ENST00000429931 906 ntBASIC21.15■□□□□ 0.98
RTCAO00442 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.15■□□□□ 0.98
RTCAO00442 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
RTCAO00442 AC099791.2-201ENST00000605725 427 ntBASIC21.15■□□□□ 0.98
RTCAO00442 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RTCAO00442 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCAO00442 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
RTCAO00442 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTCAO00442 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTCAO00442 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.14■□□□□ 0.97
RTCAO00442 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.14■□□□□ 0.97
RTCAO00442 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTCAO00442 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.14■□□□□ 0.97
RTCAO00442 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTCAO00442 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTCAO00442 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTCAO00442 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.13■□□□□ 0.97
RTCAO00442 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.13■□□□□ 0.97
RTCAO00442 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RTCAO00442 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCAO00442 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCAO00442 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTCAO00442 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.13■□□□□ 0.97
RTCAO00442 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.13■□□□□ 0.97
RTCAO00442 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.13■□□□□ 0.97
RTCAO00442 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RTCAO00442 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.12■□□□□ 0.97
RTCAO00442 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.12■□□□□ 0.97
RTCAO00442 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 SRD5A1P1-201ENST00000442297 786 ntBASIC21.12■□□□□ 0.97
RTCAO00442 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTCAO00442 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms