Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV11-1A0A0K0K1C0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AC099791.1-201ENST00000416440 715 ntBASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV11-1A0A0K0K1C0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 BX842568.3-201ENST00000418104 571 ntBASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRBV11-1A0A0K0K1C0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AC233992.3-201ENST00000607491 485 ntBASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CA15P2-201ENST00000611168 834 ntBASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
TRBV11-1A0A0K0K1C0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.58■□□□□ 0.89
TRBV11-1A0A0K0K1C0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.58■□□□□ 0.88
TRBV11-1A0A0K0K1C0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC105265.2-201ENST00000467189 838 ntBASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV11-1A0A0K0K1C0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC004687.1-201ENST00000579003 1625 ntBASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC092068.2-201ENST00000590491 1708 ntBASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV11-1A0A0K0K1C0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 OR2I1P-207ENST00000453522 948 ntBASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC126544.1-201ENST00000580842 1059 ntBASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 AC010525.1-201ENST00000585559 441 ntBASIC20.54■□□□□ 0.88
TRBV11-1A0A0K0K1C0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms