Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-2A0A087WT02 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 AC004987.1-201ENST00000428627 508 ntBASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 AL033527.3-201ENST00000566366 1196 ntBASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-2A0A087WT02 AL391422.3-201ENST00000603791 2761 ntBASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 AC139795.1-202ENST00000500444 432 ntBASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 AC074183.2-201ENST00000623112 922 ntBASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-2A0A087WT02 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV9-2A0A087WT02 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV9-2A0A087WT02 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 ANOS2P-203ENST00000472227 1816 ntBASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 DUX4L9-201ENST00000449051 1259 ntBASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 DUX4L18-201ENST00000553347 1267 ntBASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV9-2A0A087WT02 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV9-2A0A087WT02 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV9-2A0A087WT02 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms