Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 AC010525.1-201ENST00000585559 441 ntBASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 AL499627.2-201ENST00000606283 725 ntBASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRBV23OR9-2A0A075B6M9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.7■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 RARRES2P6-201ENST00000567333 442 ntBASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 IRS3P-201ENST00000223076 1006 ntBASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 AL353803.4-201ENST00000565882 1934 ntBASIC21.67■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 TSPY26P-201ENST00000476365 1326 ntBASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.64■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRBV23OR9-2A0A075B6M9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.64■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 AC026271.2-201ENST00000428091 497 ntBASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV23OR9-2A0A075B6M9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms