Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AC138028.6-201ENST00000616106 1482 ntBASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 CYP46A4P-201ENST00000414953 267 ntBASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AC090857.1-201ENST00000527400 390 ntBASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 DNM1P51-201ENST00000558149 522 ntBASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 GGTLC4P-201ENST00000402176 664 ntBASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 AC244107.1-201ENST00000442033 332 ntBASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 AL596276.2-201ENST00000447525 331 ntBASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 AP001258.2-201ENST00000529891 490 ntBASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN22Q8N7P3 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN22Q8N7P3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CLDN22Q8N7P3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN22Q8N7P3 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN22Q8N7P3 FLJ30679-201ENST00000624773 1980 ntBASIC12.41□□□□□ -0.42
CLDN22Q8N7P3 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms