Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP13P45452 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP13P45452 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP13P45452 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 AL512306.1-201ENST00000432698 848 ntBASIC14.17□□□□□ -0.14
MMP13P45452 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP13P45452 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.17□□□□□ -0.14
MMP13P45452 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MMP13P45452 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 AC138701.2-201ENST00000553634 226 ntBASIC14.17□□□□□ -0.14
MMP13P45452 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.17□□□□□ -0.14
MMP13P45452 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP13P45452 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MMP13P45452 MIR3907-201ENST00000579424 151 ntBASIC14.17□□□□□ -0.14
MMP13P45452 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP13P45452 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 AC084346.2-201ENST00000607097 949 ntBASIC14.17□□□□□ -0.14
MMP13P45452 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 AF013593.1-201ENST00000458074 1487 ntBASIC14.17□□□□□ -0.14
MMP13P45452 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP13P45452 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.17□□□□□ -0.14
MMP13P45452 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MMP13P45452 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MMP13P45452 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP13P45452 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP13P45452 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 PES1P2-201ENST00000449745 1735 ntBASIC14.16□□□□□ -0.14
MMP13P45452 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 PYY2-201ENST00000315776 282 ntBASIC14.16□□□□□ -0.14
MMP13P45452 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.16□□□□□ -0.14
MMP13P45452 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.16□□□□□ -0.14
MMP13P45452 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP13P45452 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 AC007279.1-201ENST00000448547 837 ntBASIC14.16□□□□□ -0.14
MMP13P45452 GRPEL2P1-201ENST00000453145 339 ntBASIC14.16□□□□□ -0.14
MMP13P45452 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.16□□□□□ -0.14
MMP13P45452 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP13P45452 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.16□□□□□ -0.14
MMP13P45452 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.16□□□□□ -0.14
MMP13P45452 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP13P45452 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP13P45452 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.16□□□□□ -0.14
MMP13P45452 AL356740.1-201ENST00000602192 1297 ntBASIC14.16□□□□□ -0.14
MMP13P45452 AC051619.9-201ENST00000623237 597 ntBASIC14.16□□□□□ -0.14
MMP13P45452 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.16□□□□□ -0.14
MMP13P45452 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP13P45452 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.16□□□□□ -0.14
MMP13P45452 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms