Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC114271.1-201ENST00000612689 2813 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 GEMIN8P4-201ENST00000380526 729 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC097065.1-201ENST00000425737 517 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC112250.1-201ENST00000504640 745 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 DNM1P51-201ENST00000558149 522 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AL160191.2-201ENST00000603975 601 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MEP1AP1-201ENST00000636082 1097 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 Z98259.1-201ENST00000564261 1697 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 PPT1-213ENST00000641319 2388 ntBASIC10.87□□□□□ -0.67
ODF3BA8MYP8 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.87□□□□□ -0.67
ODF3BA8MYP8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 KRT18P40-201ENST00000599859 1571 ntBASIC10.86□□□□□ -0.67
ODF3BA8MYP8 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 HLA-DMA-202ENST00000395303 1007 ntBASIC10.86□□□□□ -0.67
ODF3BA8MYP8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ODF3BA8MYP8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms