Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 RNA5SP359-201ENST00000364838 113 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SSR4P1-201ENST00000415143 412 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AC005722.1-201ENST00000431878 964 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AC104073.2-201ENST00000453737 312 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 RN7SL530P-201ENST00000485097 298 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AC116345.2-201ENST00000512837 523 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AC009779.1-201ENST00000551138 283 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AC004923.1-202ENST00000642106 209 ntBASIC11.74□□□□□ -0.53
NICN1Q9BSH3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NICN1Q9BSH3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 MIR1909-201ENST00000411312 80 ntBASIC11.73□□□□□ -0.53
NICN1Q9BSH3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.73□□□□□ -0.53
NICN1Q9BSH3 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AC104590.1-202ENST00000558368 1921 ntBASIC11.73□□□□□ -0.53
NICN1Q9BSH3 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AC106886.1-201ENST00000568660 600 ntBASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 MIR3940-201ENST00000579148 102 ntBASIC11.73□□□□□ -0.53
NICN1Q9BSH3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NICN1Q9BSH3 AL021707.6-201ENST00000609212 491 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms