Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SLC1A1P43005 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A1P43005 MIR3677-201ENST00000578964 60 ntBASIC14.26□□□□□ -0.13
SLC1A1P43005 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 AC020922.3-201ENST00000595064 547 ntBASIC14.26□□□□□ -0.13
SLC1A1P43005 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A1P43005 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC1A1P43005 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 DDX12P-201ENST00000432996 2947 ntBASIC14.26□□□□□ -0.13
SLC1A1P43005 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A1P43005 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A1P43005 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SLC1A1P43005 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SLC1A1P43005 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 AL021155.1-201ENST00000438808 2637 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 PYY2-201ENST00000315776 282 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 FAM86MP-201ENST00000340703 885 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SLC1A1P43005 MIR1247-201ENST00000408206 136 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 GPAA1P2-201ENST00000417923 928 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SLC1A1P43005 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC1A1P43005 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC1A1P43005 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC1A1P43005 RN7SL67P-201ENST00000492147 296 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 HIST2H2BC-201ENST00000498492 580 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC1A1P43005 AC242376.1-201ENST00000559033 726 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 SNORD3B-1-201ENST00000577988 758 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
SLC1A1P43005 AL359091.4-201ENST00000610052 409 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 MAX-212ENST00000555932 1673 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC1A1P43005 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 AC006144.1-201ENST00000424220 1600 ntBASIC14.25□□□□□ -0.13
SLC1A1P43005 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC1A1P43005 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC1A1P43005 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC1A1P43005 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 ANKRD20A7P-201ENST00000402318 2414 ntBASIC14.24□□□□□ -0.13
SLC1A1P43005 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLC1A1P43005 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 OR2K2-202ENST00000374428 1038 ntBASIC14.24□□□□□ -0.13
SLC1A1P43005 AL512306.1-201ENST00000432698 848 ntBASIC14.24□□□□□ -0.13
SLC1A1P43005 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC1A1P43005 PRSS3P1-201ENST00000503996 742 ntBASIC14.24□□□□□ -0.13
SLC1A1P43005 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC1A1P43005 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC1A1P43005 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms