Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC003958.1-201ENST00000435883 421 ntBASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC116345.2-201ENST00000512837 523 ntBASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC018445.4-201ENST00000624066 2291 ntBASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AC015909.3-201ENST00000572855 1794 ntBASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AP003969.2-201ENST00000623739 2275 ntBASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 FRMPD2B-201ENST00000431305 1347 ntBASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 KRT17P5-201ENST00000332088 839 ntBASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AL008638.5-201ENST00000623814 1298 ntBASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 AC245140.2-201ENST00000624054 1939 ntBASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC50Q8IVM0 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms