Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 MIR4687-201ENST00000583618 80 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AL049840.2-201ENST00000602722 535 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AC009542.2-202ENST00000619004 1067 ntBASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.9□□□□□ -0.18
PHACTR1Q9C0D0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PHACTR1Q9C0D0 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PHACTR1Q9C0D0 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
PHACTR1Q9C0D0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 KRT17P5-201ENST00000332088 839 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 BNIP3P42-201ENST00000454982 569 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 KLF17P1-201ENST00000547105 1126 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 BNIP3P29-201ENST00000598302 571 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AC005695.3-201ENST00000614522 232 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AC011447.5-201ENST00000616168 564 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 Z82244.1-201ENST00000631502 840 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 AL031587.5-201ENST00000624344 1849 ntBASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PHACTR1Q9C0D0 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 AC090502.4-201ENST00000551714 1386 ntBASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 ANKRD20A7P-201ENST00000402318 2414 ntBASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 RN7SKP214-201ENST00000364208 315 ntBASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PHACTR1Q9C0D0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms