Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 KRT8P43-201ENST00000406052 1458 ntBASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 TUBB1P2-201ENST00000422712 1306 ntBASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 TUBB1P1-201ENST00000503144 1300 ntBASIC14.52□□□□□ -0.08
CCDC50Q8IVM0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 RN7SKP214-201ENST00000364208 315 ntBASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 NAP1L6-202ENST00000641404 1222 ntBASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 PCDHB19P-202ENST00000625133 2914 ntBASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 AC008040.5-201ENST00000599781 1781 ntBASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 LPO-204ENST00000543544 2350 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC50Q8IVM0 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 GHET1-201ENST00000627071 1906 ntBASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 BRWD1P1-201ENST00000401091 371 ntBASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 NKAIN1P1-201ENST00000435754 582 ntBASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC50Q8IVM0 AF013593.1-201ENST00000458074 1487 ntBASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC50Q8IVM0 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms