Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 Z82244.1-201ENST00000631502 840 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 AC010970.1-201ENST00000445125 1848 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ERCC2P18074 NUTM2HP-201ENST00000442076 2498 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 RNA5SP423-201ENST00000517127 109 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 TMCO5B-205ENST00000530020 894 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.04□□□□□ -0.16
ERCC2P18074 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 RN7SL556P-201ENST00000582856 298 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.04□□□□□ -0.16
ERCC2P18074 MIR6842-201ENST00000612539 65 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ERCC2P18074 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 AC128714.1-201ENST00000637035 887 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 AC006480.2-201ENST00000609770 1337 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 KRT8P42-201ENST00000405771 1399 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 AC090502.4-201ENST00000551714 1386 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ERCC2P18074 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ERCC2P18074 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.04□□□□□ -0.16
ERCC2P18074 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERCC2P18074 POM121L4P-202ENST00000427789 1891 ntBASIC14.04□□□□□ -0.16
ERCC2P18074 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC2P18074 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ERCC2P18074 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC2P18074 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 DGCR9-201ENST00000609630 2415 ntBASIC14.03□□□□□ -0.16
ERCC2P18074 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC2P18074 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC2P18074 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms