Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 AL731555.1-201ENST00000634547 1259 ntBASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 AC025538.1-201ENST00000510707 1486 ntBASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDC42BPAQ5VT25 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDC42BPAQ5VT25 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
CDC42BPAQ5VT25 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDC42BPAQ5VT25 AC073585.1-201ENST00000368895 1328 ntBASIC19.77■□□□□ 0.75
CDC42BPAQ5VT25 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 DERL2-206ENST00000572834 589 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 RN7SL5P-201ENST00000581458 321 ntBASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 CASC4P1-201ENST00000456608 1312 ntBASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 RPL21P135-201ENST00000442539 791 ntBASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDC42BPAQ5VT25 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 HLA-DRB6-202ENST00000437183 1090 ntBASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 LINC01230-201ENST00000625222 3017 ntBASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 OS9-203ENST00000389142 2457 ntTSL 5 BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDC42BPAQ5VT25 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 PARK7-204ENST00000377493 795 ntTSL 2 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 ZNF226-212ENST00000588795 641 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 AD000091.1-201ENST00000592379 287 ntBASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 AL160287.1-203ENST00000637960 1061 ntBASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42BPAQ5VT25 PABPC1P2-201ENST00000471997 1805 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms