Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CAV3P56539 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CAV3P56539 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.28□□□□□ -0.44
CAV3P56539 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.28□□□□□ -0.44
CAV3P56539 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 AC011481.3-201ENST00000623895 5594 ntBASIC12.28□□□□□ -0.44
CAV3P56539 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CAV3P56539 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.28□□□□□ -0.44
CAV3P56539 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CAV3P56539 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 EGLN3-205ENST00000547327 2849 ntBASIC12.28□□□□□ -0.44
CAV3P56539 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.28□□□□□ -0.44
CAV3P56539 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.28□□□□□ -0.44
CAV3P56539 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.28□□□□□ -0.44
CAV3P56539 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.28□□□□□ -0.44
CAV3P56539 AL136301.1-201ENST00000615830 422 ntBASIC12.28□□□□□ -0.44
CAV3P56539 MIR6752-201ENST00000618442 71 ntBASIC12.28□□□□□ -0.44
CAV3P56539 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 CTAGE13P-201ENST00000416709 2446 ntBASIC12.28□□□□□ -0.44
CAV3P56539 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.28□□□□□ -0.44
CAV3P56539 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CAV3P56539 AL583810.2-201ENST00000556430 3254 ntBASIC12.28□□□□□ -0.44
CAV3P56539 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
CAV3P56539 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CAV3P56539 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.44
CAV3P56539 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 CICP9-201ENST00000444451 1913 ntBASIC12.27□□□□□ -0.44
CAV3P56539 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CAV3P56539 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.27□□□□□ -0.44
CAV3P56539 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CAV3P56539 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.27□□□□□ -0.45
CAV3P56539 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.27□□□□□ -0.45
CAV3P56539 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
CAV3P56539 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.27□□□□□ -0.45
CAV3P56539 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.27□□□□□ -0.45
CAV3P56539 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.27□□□□□ -0.45
CAV3P56539 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.27□□□□□ -0.45
CAV3P56539 HIST2H2BB-201ENST00000449108 381 ntBASIC12.27□□□□□ -0.45
CAV3P56539 BNIP3P42-201ENST00000454982 569 ntBASIC12.27□□□□□ -0.45
CAV3P56539 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.27□□□□□ -0.45
CAV3P56539 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.27□□□□□ -0.45
CAV3P56539 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.27□□□□□ -0.45
CAV3P56539 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.27□□□□□ -0.45
CAV3P56539 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.27□□□□□ -0.45
CAV3P56539 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.27□□□□□ -0.45
CAV3P56539 BNIP3P29-201ENST00000598302 571 ntBASIC12.27□□□□□ -0.45
CAV3P56539 AC011447.5-201ENST00000616168 564 ntBASIC12.27□□□□□ -0.45
CAV3P56539 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms