Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CSPG4P11-201ENST00000560634 4910 ntBASIC12.5□□□□□ -0.41
P04436 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 MARK2P9-201ENST00000430958 1727 ntBASIC12.5□□□□□ -0.41
P04436 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.5□□□□□ -0.41
P04436 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P04436 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
P04436 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.5□□□□□ -0.41
P04436 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P04436 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P04436 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04436 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P04436 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
P04436 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
P04436 AL513497.1-201ENST00000624273 2083 ntBASIC12.49□□□□□ -0.41
P04436 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
P04436 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 U3.5-201ENST00000363448 216 ntBASIC12.49□□□□□ -0.41
P04436 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
P04436 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.49□□□□□ -0.41
P04436 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC12.49□□□□□ -0.41
P04436 AC093909.3-201ENST00000504783 336 ntBASIC12.49□□□□□ -0.41
P04436 PGAM1P12-201ENST00000505622 748 ntBASIC12.49□□□□□ -0.41
P04436 TBC1D3P6-201ENST00000505954 962 ntBASIC12.49□□□□□ -0.41
P04436 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
P04436 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 C2orf69P1-201ENST00000563532 1093 ntBASIC12.49□□□□□ -0.41
P04436 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.49□□□□□ -0.41
P04436 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.49□□□□□ -0.41
P04436 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 AC011247.3-201ENST00000603297 438 ntBASIC12.49□□□□□ -0.41
P04436 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.49□□□□□ -0.41
P04436 AC073592.2-201ENST00000623062 780 ntBASIC12.49□□□□□ -0.41
P04436 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
P04436 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
P04436 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.49□□□□□ -0.41
P04436 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.49□□□□□ -0.41
P04436 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04436 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.49□□□□□ -0.41
P04436 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
P04436 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 AC009474.1-201ENST00000455096 1565 ntBASIC12.48□□□□□ -0.41
P04436 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
P04436 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
P04436 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.48□□□□□ -0.41
P04436 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.48□□□□□ -0.41
P04436 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.48□□□□□ -0.41
P04436 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.48□□□□□ -0.41
P04436 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P04436 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms