Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-AP01891 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 AL132642.2-201ENST00000623423 1998 ntBASIC11.62□□□□□ -0.55
HLA-AP01891 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-AP01891 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.62□□□□□ -0.55
HLA-AP01891 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-AP01891 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-AP01891 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-AP01891 BTNL10-201ENST00000595971 695 ntBASIC11.62□□□□□ -0.55
HLA-AP01891 OR10B1P-201ENST00000601666 907 ntBASIC11.62□□□□□ -0.55
HLA-AP01891 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HLA-AP01891 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-AP01891 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-AP01891 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HLA-AP01891 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
HLA-AP01891 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-AP01891 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-AP01891 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-AP01891 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HLA-AP01891 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-AP01891 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-AP01891 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-AP01891 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-AP01891 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 AL590640.2-201ENST00000457038 527 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 CROCCP4-201ENST00000457096 498 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-AP01891 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-AP01891 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-AP01891 AC140658.4-201ENST00000561990 352 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-AP01891 AC233724.13-201ENST00000598383 410 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 AL356740.1-201ENST00000602192 1297 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 AL022328.1-201ENST00000610050 478 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-AP01891 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 AL035252.4-201ENST00000624174 288 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 AL161773.1-201ENST00000624845 863 ntBASIC11.61□□□□□ -0.55
HLA-AP01891 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-AP01891 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-AP01891 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-AP01891 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms