Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
NR4A1P22736 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.84□□□□□ -0.35
NR4A1P22736 AL161932.2-201ENST00000435436 679 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 MTX1P1-201ENST00000440904 838 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 GOLGA2P4-201ENST00000441462 777 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 PFN1P12-201ENST00000455938 534 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 AC092658.1-201ENST00000505836 891 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 ALG3P1-201ENST00000508806 1114 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
NR4A1P22736 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.84□□□□□ -0.35
NR4A1P22736 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.84□□□□□ -0.35
NR4A1P22736 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 RN7SL219P-201ENST00000582872 296 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.84□□□□□ -0.35
NR4A1P22736 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 AC073957.3-201ENST00000609998 6758 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
NR4A1P22736 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NR4A1P22736 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.84□□□□□ -0.35
NR4A1P22736 AC009093.2-202ENST00000620513 2079 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 AL359510.2-201ENST00000624958 2249 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 AC027020.2-201ENST00000602585 2389 ntBASIC12.84□□□□□ -0.35
NR4A1P22736 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
NR4A1P22736 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.83□□□□□ -0.35
NR4A1P22736 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.83□□□□□ -0.35
NR4A1P22736 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NR4A1P22736 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NR4A1P22736 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NR4A1P22736 AL357140.3-201ENST00000639753 1983 ntBASIC12.83□□□□□ -0.35
NR4A1P22736 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NR4A1P22736 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.83□□□□□ -0.35
NR4A1P22736 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 AC092139.4-201ENST00000624318 2794 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
NR4A1P22736 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 MIR326-201ENST00000362220 95 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.83□□□□□ -0.36
NR4A1P22736 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.83□□□□□ -0.36
NR4A1P22736 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 HIST2H2BB-201ENST00000449108 381 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 RPSAP36-202ENST00000494591 1261 ntBASIC12.83□□□□□ -0.36
NR4A1P22736 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NR4A1P22736 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.83□□□□□ -0.36
NR4A1P22736 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.83□□□□□ -0.36
NR4A1P22736 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.83□□□□□ -0.36
NR4A1P22736 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms