Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CD74P04233 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
CD74P04233 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CD74P04233 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
CD74P04233 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.53□□□□□ -0.56
CD74P04233 AP000346.4-201ENST00000614827 381 ntBASIC11.53□□□□□ -0.56
CD74P04233 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CD74P04233 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.52□□□□□ -0.56
CD74P04233 AC099521.2-201ENST00000619354 2036 ntBASIC11.52□□□□□ -0.56
CD74P04233 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CD74P04233 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.52□□□□□ -0.57
CD74P04233 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.52□□□□□ -0.57
CD74P04233 DGCR5-201ENST00000399539 862 ntBASIC11.52□□□□□ -0.57
CD74P04233 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.52□□□□□ -0.57
CD74P04233 FAM207CP-201ENST00000443486 507 ntBASIC11.52□□□□□ -0.57
CD74P04233 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 USP32P1-208ENST00000506594 1164 ntBASIC11.52□□□□□ -0.57
CD74P04233 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.52□□□□□ -0.57
CD74P04233 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.52□□□□□ -0.57
CD74P04233 AP006547.1-201ENST00000563435 692 ntBASIC11.52□□□□□ -0.57
CD74P04233 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.52□□□□□ -0.57
CD74P04233 TP53TG3HP-202ENST00000569755 579 ntBASIC11.52□□□□□ -0.57
CD74P04233 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC11.52□□□□□ -0.57
CD74P04233 AL022328.1-201ENST00000610050 478 ntBASIC11.52□□□□□ -0.57
CD74P04233 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.52□□□□□ -0.57
CD74P04233 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.52□□□□□ -0.57
CD74P04233 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.57
CD74P04233 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD74P04233 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CD74P04233 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CD74P04233 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD74P04233 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms