Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 TNRC18P1-201ENST00000502875 3650 ntBASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PHACTR1Q9C0D0 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 OR8S1-201ENST00000310194 1080 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 CFL1P6-201ENST00000400899 494 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ATP5G2P4-201ENST00000442175 420 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 RCC2P8-201ENST00000502779 1035 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 RNA5SP412-201ENST00000516234 123 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 AC010328.2-201ENST00000597698 1111 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 AL133467.4-201ENST00000602953 725 ntBASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PHACTR1Q9C0D0 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 AC015819.3-201ENST00000624305 2674 ntBASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 BTBD6P1-201ENST00000412176 1267 ntBASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 KRT8P18-201ENST00000413425 1445 ntBASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.94□□□□□ -0.18
PHACTR1Q9C0D0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms