Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 OR51A9P-201ENST00000422578 911 ntBASIC10.06□□□□□ -0.8
APOC4P55056 PSAT1P2-201ENST00000426107 972 ntBASIC10.06□□□□□ -0.8
APOC4P55056 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 AC024293.1-201ENST00000467930 498 ntBASIC10.06□□□□□ -0.8
APOC4P55056 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 RPS23-207ENST00000511844 530 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC10.06□□□□□ -0.8
APOC4P55056 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC10.06□□□□□ -0.8
APOC4P55056 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 AC073592.2-201ENST00000623062 780 ntBASIC10.06□□□□□ -0.8
APOC4P55056 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC10.06□□□□□ -0.8
APOC4P55056 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
APOC4P55056 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.06□□□□□ -0.8
APOC4P55056 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
APOC4P55056 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
APOC4P55056 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 RPL10-203ENST00000406022 748 ntTSL 3 BASIC10.05□□□□□ -0.8
APOC4P55056 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC10.05□□□□□ -0.8
APOC4P55056 PFN2-212ENST00000490975 858 ntTSL 4 BASIC10.05□□□□□ -0.8
APOC4P55056 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC10.05□□□□□ -0.8
APOC4P55056 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC10.05□□□□□ -0.8
APOC4P55056 CD44-224ENST00000526669 870 ntTSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC10.05□□□□□ -0.8
APOC4P55056 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC10.05□□□□□ -0.8
APOC4P55056 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 TYMSP2-201ENST00000589501 424 ntBASIC10.05□□□□□ -0.8
APOC4P55056 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 AC011247.3-201ENST00000603297 438 ntBASIC10.05□□□□□ -0.8
APOC4P55056 AC006483.2-201ENST00000609813 515 ntBASIC10.05□□□□□ -0.8
APOC4P55056 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC10.05□□□□□ -0.8
APOC4P55056 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
APOC4P55056 AC145098.2-201ENST00000623593 3026 ntBASIC10.05□□□□□ -0.8
APOC4P55056 LINC01230-201ENST00000625222 3017 ntBASIC10.05□□□□□ -0.8
APOC4P55056 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC10.05□□□□□ -0.8
APOC4P55056 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
APOC4P55056 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms