Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.33□□□□□ -0.28
CD97P48960 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CD97P48960 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 Z69890.1-201ENST00000382990 339 ntBASIC13.33□□□□□ -0.28
CD97P48960 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.33□□□□□ -0.28
CD97P48960 AC003686.1-201ENST00000550956 1034 ntBASIC13.33□□□□□ -0.28
CD97P48960 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 AC007326.1-201ENST00000604539 458 ntBASIC13.33□□□□□ -0.28
CD97P48960 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CD97P48960 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.33□□□□□ -0.28
CD97P48960 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 AC024075.2-201ENST00000598112 1473 ntBASIC13.33□□□□□ -0.28
CD97P48960 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD97P48960 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.33□□□□□ -0.28
CD97P48960 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD97P48960 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
CD97P48960 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 AL590440.2-201ENST00000641973 1595 ntBASIC13.32□□□□□ -0.28
CD97P48960 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CD97P48960 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.32□□□□□ -0.28
CD97P48960 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.32□□□□□ -0.28
CD97P48960 AC092638.2-201ENST00000441105 947 ntBASIC13.32□□□□□ -0.28
CD97P48960 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 DUTP3-201ENST00000450025 415 ntBASIC13.32□□□□□ -0.28
CD97P48960 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 RN7SL81P-201ENST00000493781 261 ntBASIC13.32□□□□□ -0.28
CD97P48960 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.32□□□□□ -0.28
CD97P48960 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 AC012158.2-201ENST00000536546 354 ntBASIC13.32□□□□□ -0.28
CD97P48960 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CD97P48960 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 Z98257.2-202ENST00000641138 1548 ntBASIC13.32□□□□□ -0.28
CD97P48960 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.32□□□□□ -0.28
CD97P48960 MRPL37P1-201ENST00000592451 1337 ntBASIC13.32□□□□□ -0.28
CD97P48960 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 DDX12P-201ENST00000432996 2947 ntBASIC13.32□□□□□ -0.28
CD97P48960 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
CD97P48960 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD97P48960 AC090502.4-201ENST00000551714 1386 ntBASIC13.32□□□□□ -0.28
CD97P48960 AC010969.2-201ENST00000602458 3231 ntBASIC13.32□□□□□ -0.28
CD97P48960 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms