Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP13P45452 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.29□□□□□ -0.12
MMP13P45452 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP13P45452 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP13P45452 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.29□□□□□ -0.12
MMP13P45452 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP13P45452 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.29□□□□□ -0.12
MMP13P45452 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.29□□□□□ -0.12
MMP13P45452 AC097724.1-201ENST00000609581 426 ntBASIC14.29□□□□□ -0.12
MMP13P45452 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
MMP13P45452 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.29□□□□□ -0.12
MMP13P45452 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP13P45452 AL139424.3-202ENST00000641619 917 ntBASIC14.29□□□□□ -0.12
MMP13P45452 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP13P45452 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 CAP2P1-201ENST00000557743 1390 ntBASIC14.29□□□□□ -0.12
MMP13P45452 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
MMP13P45452 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP13P45452 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP13P45452 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
MMP13P45452 HSPA8P9-201ENST00000485881 1943 ntBASIC14.29□□□□□ -0.12
MMP13P45452 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP13P45452 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 AP001972.5-201ENST00000624624 2338 ntBASIC14.29□□□□□ -0.12
MMP13P45452 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP13P45452 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MMP13P45452 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MMP13P45452 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP13P45452 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MMP13P45452 AL807761.2-201ENST00000422849 729 ntBASIC14.28□□□□□ -0.12
MMP13P45452 PPP1R2P4-201ENST00000424051 595 ntBASIC14.28□□□□□ -0.12
MMP13P45452 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP13P45452 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP13P45452 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.28□□□□□ -0.12
MMP13P45452 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP13P45452 FAM90A11P-201ENST00000518378 2218 ntBASIC14.28□□□□□ -0.12
MMP13P45452 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.28□□□□□ -0.12
MMP13P45452 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 FGFR3P5-201ENST00000564496 886 ntBASIC14.28□□□□□ -0.12
MMP13P45452 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.28□□□□□ -0.12
MMP13P45452 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.28□□□□□ -0.12
MMP13P45452 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
MMP13P45452 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.28□□□□□ -0.12
MMP13P45452 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 AC093462.1-201ENST00000621167 1683 ntBASIC14.28□□□□□ -0.12
MMP13P45452 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MMP13P45452 AC015967.2-201ENST00000624092 234 ntBASIC14.28□□□□□ -0.12
MMP13P45452 AC006435.4-201ENST00000625037 234 ntBASIC14.28□□□□□ -0.12
MMP13P45452 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 AL356737.1-201ENST00000634391 234 ntBASIC14.28□□□□□ -0.12
MMP13P45452 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP13P45452 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MMP13P45452 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP13P45452 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.27□□□□□ -0.12
MMP13P45452 ZNF493-208ENST00000599461 1769 ntBASIC14.27□□□□□ -0.12
MMP13P45452 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP13P45452 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.27□□□□□ -0.12
MMP13P45452 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms