Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC008972.2-201ENST00000606587 494 ntBASIC12.53□□□□□ -0.4
P04436 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 AC073869.1-201ENST00000415574 2762 ntBASIC12.53□□□□□ -0.4
P04436 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.53□□□□□ -0.4
P04436 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P04436 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 GRK6P1-201ENST00000400595 1711 ntBASIC12.53□□□□□ -0.4
P04436 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.53□□□□□ -0.4
P04436 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
P04436 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.53□□□□□ -0.4
P04436 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 CR383656.2-201ENST00000548656 2254 ntBASIC12.53□□□□□ -0.4
P04436 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04436 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 GUCY2EP-203ENST00000531117 1918 ntBASIC12.52□□□□□ -0.4
P04436 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
P04436 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
P04436 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.52□□□□□ -0.4
P04436 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.52□□□□□ -0.4
P04436 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.52□□□□□ -0.4
P04436 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.52□□□□□ -0.4
P04436 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P04436 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P04436 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P04436 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
P04436 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.52□□□□□ -0.41
P04436 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.52□□□□□ -0.41
P04436 PSAT1P2-201ENST00000426107 972 ntBASIC12.52□□□□□ -0.41
P04436 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.52□□□□□ -0.41
P04436 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.52□□□□□ -0.41
P04436 KRT18P37-201ENST00000520711 1282 ntBASIC12.52□□□□□ -0.41
P04436 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.52□□□□□ -0.41
P04436 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
P04436 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 AC132812.1-201ENST00000583145 892 ntBASIC12.52□□□□□ -0.41
P04436 AP005264.6-204ENST00000588436 719 ntBASIC12.52□□□□□ -0.41
P04436 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.52□□□□□ -0.41
P04436 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P04436 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.52□□□□□ -0.41
P04436 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
P04436 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.52□□□□□ -0.41
P04436 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P04436 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.52□□□□□ -0.41
P04436 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04436 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.51□□□□□ -0.41
P04436 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P04436 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P04436 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.51□□□□□ -0.41
P04436 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
P04436 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P04436 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.51□□□□□ -0.41
P04436 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04436 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms