Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 AC004241.5-201ENST00000623870 2448 ntBASIC20.94■□□□□ 0.94
VPS8Q8N3P4 AC125807.2-201ENST00000513358 3514 ntBASIC20.94■□□□□ 0.94
VPS8Q8N3P4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 MIR632-201ENST00000385193 94 ntBASIC20.94■□□□□ 0.94
VPS8Q8N3P4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 AC114812.4-201ENST00000506676 757 ntBASIC20.94■□□□□ 0.94
VPS8Q8N3P4 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS8Q8N3P4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AC006144.1-201ENST00000424220 1600 ntBASIC20.93■□□□□ 0.94
VPS8Q8N3P4 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 MIR324-201ENST00000362183 83 ntBASIC20.93■□□□□ 0.94
VPS8Q8N3P4 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 RPS18P9-201ENST00000482817 460 ntBASIC20.93■□□□□ 0.94
VPS8Q8N3P4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AC079414.2-201ENST00000567157 1104 ntBASIC20.93■□□□□ 0.94
VPS8Q8N3P4 ANKRD26P1-203ENST00000569528 966 ntBASIC20.93■□□□□ 0.94
VPS8Q8N3P4 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC20.93■□□□□ 0.94
VPS8Q8N3P4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 AC009093.9-201ENST00000566038 1611 ntBASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 AGPAT5P1-201ENST00000455855 1019 ntBASIC20.92■□□□□ 0.94
VPS8Q8N3P4 HINT1-204ENST00000506908 681 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 AL591424.3-201ENST00000614278 872 ntBASIC20.92■□□□□ 0.94
VPS8Q8N3P4 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VPS8Q8N3P4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms