Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 FAM90A2P-201ENST00000511144 1395 ntBASIC13.83□□□□□ -0.2
APOA4P06727 FAM90A25P-201ENST00000528404 1395 ntBASIC13.83□□□□□ -0.2
APOA4P06727 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA4P06727 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA4P06727 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 AL031719.1-201ENST00000623365 2587 ntBASIC13.82□□□□□ -0.2
APOA4P06727 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.82□□□□□ -0.2
APOA4P06727 OR2I1P-208ENST00000641137 4948 ntBASIC13.82□□□□□ -0.2
APOA4P06727 KRT8P31-201ENST00000504812 1408 ntBASIC13.82□□□□□ -0.2
APOA4P06727 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 AF013593.1-201ENST00000458074 1487 ntBASIC13.82□□□□□ -0.2
APOA4P06727 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.82□□□□□ -0.2
APOA4P06727 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
APOA4P06727 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.82□□□□□ -0.2
APOA4P06727 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 NUP210P1-202ENST00000504322 710 ntBASIC13.82□□□□□ -0.2
APOA4P06727 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.82□□□□□ -0.2
APOA4P06727 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.82□□□□□ -0.2
APOA4P06727 MIR4754-201ENST00000582477 89 ntBASIC13.82□□□□□ -0.2
APOA4P06727 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.82□□□□□ -0.2
APOA4P06727 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.82□□□□□ -0.2
APOA4P06727 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.82□□□□□ -0.2
APOA4P06727 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.82□□□□□ -0.2
APOA4P06727 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 TNRC18P1-201ENST00000502875 3650 ntBASIC13.82□□□□□ -0.2
APOA4P06727 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA4P06727 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA4P06727 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
APOA4P06727 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.81□□□□□ -0.2
APOA4P06727 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
APOA4P06727 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 MIR645-201ENST00000385283 94 ntBASIC13.81□□□□□ -0.2
APOA4P06727 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.81□□□□□ -0.2
APOA4P06727 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 DUTP3-201ENST00000450025 415 ntBASIC13.81□□□□□ -0.2
APOA4P06727 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.81□□□□□ -0.2
APOA4P06727 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.81□□□□□ -0.2
APOA4P06727 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 RTN3P1-201ENST00000536295 711 ntBASIC13.81□□□□□ -0.2
APOA4P06727 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.81□□□□□ -0.2
APOA4P06727 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.81□□□□□ -0.2
APOA4P06727 AC026803.1-201ENST00000569130 274 ntBASIC13.81□□□□□ -0.2
APOA4P06727 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 AL353770.1-201ENST00000614915 403 ntBASIC13.81□□□□□ -0.2
APOA4P06727 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 AL139099.5-201ENST00000635274 300 ntBASIC13.81□□□□□ -0.2
APOA4P06727 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 AC138627.1-207ENST00000641560 1006 ntBASIC13.81□□□□□ -0.2
APOA4P06727 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOA4P06727 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.81□□□□□ -0.2
APOA4P06727 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOA4P06727 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms